Dr. Johnson's Publications

“Phylogenetic divergence in leatherside chub (Gila copei) inferred from mitochondrial cytochrome b sequences”, Molecular Ecology 9: 1029-1035, 2000.
- Authors: Jerald B. Johnson, Steve Jordan
“Predation environment predicts divergent life-history phenotypes among populations of the livebearing fish Brachyrhaphis rhabdophora”, Oecologia 126: 142-149, 2001.
- Authors: Jerald B. Johnson, Mark C. Belk
“Hierarchical organization of genetic variation in the Costa Rican livebearing fish Brachyrhaphis rhabdophora (Poeciliidae)”, Biological Journal of the Linnean Society 72: 519–527, 2001.
- Author: Jerald B. Johnson
“Adaptive life-history evolution in the livebearing fish Brachyrhaphis rhabdophora: genetic basis for parallel divergence in age and size at maturity and a test of predator-induced plasticity”, Evolution 55(7): 1486-1491, 2001.
- Author: Jerald B. Johnson
“Evolution after the flood: phylogeography of the desert fish Utah chub”, Evolution 56(5): 948-960, 2002.
- Author: Jerald B. Johnson
“Divergent life histories among populations of the fish Brachyrhaphis rhabdophora: detecting putative agents of selection by candidate model analysis”, Oikos 96: 82-91, 2002.
- Author: Jerald B. Johnson
“The Pacific Salmon Wars: What Science Brings to the Challenge of Recovering Species”, Annu. Rev. Ecol. Syst. 33: 665-706, 2002.
- Authors: Mary H. Ruckelshaus, Phil Levin, Jerald B. Johnson, Peter M. Kareiva
“Predator exposure alters female mate choice in the green swordtail”, Behavioral Ecology 14(5): 619-625, 2003.
- Authors: Jerald B. Johnson, Alexandra L. Basolo
“Model selection in ecology and evolution”, Trends in Ecol. and Evol. 19(2): 101-108, 2004.
- Authors: Jerald B. Johnson, Kristian S. Omland
“Temperate Utah chub form valid otolith annuli in the absence of fluctuating water temperature”, Journal of Fish Biology 65: 293-298, 2004.
- Authors: Jerald B. Johnson, Mark C. Belk
“Neglected Taxonomy of Rare Desert Fishes: Congruent Evidence for Two Species of Leatherside Chub”, Syst. Biol. 53(6): 841-855, 2004.
- Authors: Jerald B. Johnson, Thomas E. Dowling, Mark C. Belk
“Variation in inrinsic individual growth rate among populations of leatherside chub (Snyderichthys copei Jordan & Gilbert): adaptation to temperature or length of growing season?”, Ecology of Freshwater Fish 14: 177-184, 2005.
- Authors: Mark C. Belk, Jerald B. Johnson, K. W. Wilson, M. E. Smith, D. D. Houston
“Habitat predicts reproductive superfetation and body shape in the livebearing fish Poeciliopsis turrubarensis”, Oikos 116: 995-1005, 2007.
- Authors: J. Jaime Zúñiga-Vega, David N. Reznick, Jerald B. Johnson
“Impact of ocean barriers, topography, and glaciation on phylogeography of the catfish Trichomycterus areolatus (Teleostei: Trichomycteridae) in Chile”, Biological Journal of the Linnean Society 97: 876-892, 2009.
- Authors: Peter J. Unmack, A. Bennin, Evelyn Habit, Pedro Victoriano, and Jerald B. Johnson
“Phylogeography of the livebearer Xenophallus umbratilis (Teleostei: Poeciliidae): glacial cycles and sea level change predict diversification of a freshwater tropical fish”, Molecular Ecology 18: 1640-1653, 2009.
- Authors: Carissa P. Jones and Jerald B. Johnson
“Differential mortality drives life history evolution and shapes population demography in the livebearing fish Brachyrhaphis rhabdophora”, Ecology 90: 2243-2252, 2009.
- Authors: Jerald B. Johnson and Jaime J. Zúñiga-Vega
- * Selected for Faculty of 1000 in Biology, September 2009
“Where’s the ecology in ‘molecular ecology’?”, Oikos 118: 1601-1609, 2009.
- Authors: Johnson, J. B., S. Peat, and B. J. Adams
“Evolution education in Utah: a state office of education-university partnership focuses on why evolution matters”, Evolution: Education & Outreach 2: 349-358, 2009.
- Authors: Johnson, J. B., M. Adair, B. J. Adams, D. J. Fairbanks, V. Itamura, D. E. Jeffery, D. Merrell, S. M. Ritter, and R. R. Tolman
“Biogeography of the livebearing fish Poecilia gillii in Costa Rica: are phylogeographic breaks congruent with fish community boundaries?”, Molecular Ecology 18: 4088-4101, 2009.
- Authors: Lee, J. B. and J. B. Johnson
“Expanding the toolbox for phylogeographic analysis”, Molecular Ecology 18: 4137-4139, 2009.
- Authors: Johnson, J. B. and K. A. Crandall
“Does sympatry predict life history and morphological diversification in the Mexican livebearing fish Poeciliopsis baenschi?”, Biological Journal of the Linnean Society 100: 608-618, 2010.
- Authors: Scott, L. E. and J. B. Johnson
“Phylogeography’s past, present, and future: 10 years after Avise 2000”, Molecular Phylogenetics and Evolution 54: 291-301, 2010.
- Authors: Hickerson, M. J., B. C. Carstens, J. Cavender-Bares, K. A. Crandall, C. H. Graham, J. B. Johnson, L. Rissler, P. F. Victoriano, and A. Yoder
“Ecological drivers of life-history divergence in Poeciliid fishes”, In Ecology and Evolution of Livebearing Fishes Eds. J. Evans, A. Pilastro, and I. Schlupp. Oxford Univ. Press. In Press, 2011.
- Authors: Johnson, J. B. and J. C. Bagley


	Dr. Johnson's Publications “Phylogenetic divergence in leatherside chub (Gila copei) inferred from mitochondrial cytochrome b sequences”, Molecular Ecology 9: 1029-1035, 2000. Authors: Jerald B. Johnson, Steve Jordan “Predation environment predicts divergent life-history phenotypes among populations of the livebearing fish Brachyrhaphis rhabdophora”, Oecologia 126: 142-149, 2001. Authors: Jerald B. Johnson, Mark C. Belk “Hierarchical organization of genetic variation in the Costa Rican livebearing fish Brachyrhaphis rhabdophora (Poeciliidae)”, Biological Journal of the Linnean Society 72: 519–527, 2001. Author: Jerald B. Johnson “Adaptive life-history evolution in the livebearing fish Brachyrhaphis rhabdophora: genetic basis for parallel divergence in age and size at maturity and a test of predator-induced plasticity”, Evolution 55(7): 1486-1491, 2001. Author: Jerald B. Johnson “Evolution after the flood: phylogeography of the desert fish Utah chub”, Evolution 56(5): 948-960, 2002. Author: Jerald B. Johnson “Divergent life histories among populations of the fish Brachyrhaphis rhabdophora: detecting putative agents of selection by candidate model analysis”, Oikos 96: 82-91, 2002. Author: Jerald B. Johnson “The Pacific Salmon Wars: What Science Brings to the Challenge of Recovering Species”, Annu. Rev. Ecol. Syst. 33: 665-706, 2002. Authors: Mary H. Ruckelshaus, Phil Levin, Jerald B. Johnson, Peter M. Kareiva “Predator exposure alters female mate choice in the green swordtail”, Behavioral Ecology 14(5): 619-625, 2003. Authors: Jerald B. Johnson, Alexandra L. Basolo “Model selection in ecology and evolution”, Trends in Ecol. and Evol. 19(2): 101-108, 2004. Authors: Jerald B. Johnson, Kristian S. Omland “Temperate Utah chub form valid otolith annuli in the absence of fluctuating water temperature”, Journal of Fish Biology 65: 293-298, 2004. Authors: Jerald B. Johnson, Mark C. Belk “Neglected Taxonomy of Rare Desert Fishes: Congruent Evidence for Two Species of Leatherside Chub”, Syst. Biol. 53(6): 841-855, 2004. Authors: Jerald B. Johnson, Thomas E. Dowling, Mark C. Belk “Variation in inrinsic individual growth rate among populations of leatherside chub (Snyderichthys copei Jordan & Gilbert): adaptation to temperature or length of growing season?”, Ecology of Freshwater Fish 14: 177-184, 2005. Authors: Mark C. Belk, Jerald B. Johnson, K. W. Wilson, M. E. Smith, D. D. Houston “Habitat predicts reproductive superfetation and body shape in the livebearing fish Poeciliopsis turrubarensis”, Oikos 116: 995-1005, 2007. Authors: J. Jaime Zúñiga-Vega, David N. Reznick, Jerald B. Johnson “Impact of ocean barriers, topography, and glaciation on phylogeography of the catfish Trichomycterus areolatus (Teleostei: Trichomycteridae) in Chile”, Biological Journal of the Linnean Society 97: 876-892, 2009. Authors: Peter J. Unmack, A. Bennin, Evelyn Habit, Pedro Victoriano, and Jerald B. Johnson “Phylogeography of the livebearer Xenophallus umbratilis (Teleostei: Poeciliidae): glacial cycles and sea level change predict diversification of a freshwater tropical fish”, Molecular Ecology 18: 1640-1653, 2009. Authors: Carissa P. Jones and Jerald B. Johnson “Differential mortality drives life history evolution and shapes population demography in the livebearing fish Brachyrhaphis rhabdophora”, Ecology 90: 2243-2252, 2009. Authors: Jerald B. Johnson and Jaime J. Zúñiga-Vega * Selected for Faculty of 1000 in Biology, September 2009 “Where’s the ecology in ‘molecular ecology’?”, Oikos 118: 1601-1609, 2009. Authors: Johnson, J. B., S. Peat, and B. J. Adams “Evolution education in Utah: a state office of education-university partnership focuses on why evolution matters”, Evolution: Education & Outreach 2: 349-358, 2009. Authors: Johnson, J. B., M. Adair, B. J. Adams, D. J. Fairbanks, V. Itamura, D. E. Jeffery, D. Merrell, S. M. Ritter, and R. R. Tolman “Biogeography of the livebearing fish Poecilia gillii in Costa Rica: are phylogeographic breaks congruent with fish community boundaries?”, Molecular Ecology 18: 4088-4101, 2009. Authors: Lee, J. B. and J. B. Johnson “Expanding the toolbox for phylogeographic analysis”, Molecular Ecology 18: 4137-4139, 2009. Authors: Johnson, J. B. and K. A. Crandall “Does sympatry predict life history and morphological diversification in the Mexican livebearing fish Poeciliopsis baenschi?”, Biological Journal of the Linnean Society 100: 608-618, 2010. Authors: Scott, L. E. and J. B. Johnson “Phylogeography’s past, present, and future: 10 years after Avise 2000”, Molecular Phylogenetics and Evolution 54: 291-301, 2010. Authors: Hickerson, M. J., B. C. Carstens, J. Cavender-Bares, K. A. Crandall, C. H. Graham, J. B. Johnson, L. Rissler, P. F. Victoriano, and A. Yoder “Ecological drivers of life-history divergence in Poeciliid fishes”, In Ecology and Evolution of Livebearing Fishes Eds. J. Evans, A. Pilastro, and I. Schlupp. Oxford Univ. Press. In Press, 2011. Authors: Johnson, J. B. and J. C. Bagley